Biography

Allan T. Souza is a University researcher at the Institute for Atmospheric and Earth System Research (INAR), University of Helsinki. His research interests include the climate drivers on species distribution and population dynamics, the impacts of biological invasions on ecosystems and wildlife management. Additionally, he is heavily involved in research data stewardship, ensuring the quality, accessibility, and usability of environmental data, facilitating data-driven research and informed decision-making.

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Interests
  • Climate change
  • Biological invasions
  • Conservation
  • Species distribution
  • Fisheries
  • Data science
  • Data analysis
  • Data visualization
  • Data management
  • Data stewardship
  • Research Infrastructures
Education
  • Data Steward, 2023

    University of Vienna (Austria)

  • PhD in Marine and Environmental Sciences, 2013

    University of Porto (Portugal)

  • MSc. in Biological Sciences - Zoology, 2007

    Universidade Federal da Paraíba (Brazil)

  • BSc in Biological Sciences - Marine Biology, 2005

    Universidade Federal Fluminense (Brazil)

Skills

Ecology
Conservation
R
Statistics
Machine learning
Data stewardship

Experience

 
 
 
 
 
University researcher / data scientist / data steward
Jan 2023 – Present Helsinki (Finland)
 
 
 
 
 
Researcher
Jan 2020 – Dec 2022 Ceske Budejovice (Czech Republic)
Ecology and behavior of freshwater fish.
 
 
 
 
 
Postdoctoral researcher
Jan 2017 – Dec 2019 Ceske Budejovice (Czech Republic)
Effects of climate change on the fishery yield in inland waters.
 
 
 
 
 
Postdoctoral researcher
Jan 2016 – Dec 2016 Ponta Delgada, Azores (Portugal)
Developing novel metrics for the evaluation of water quality for the Azorean freshwater systems.
 
 
 
 
 
Science management and development
Feb 2014 – Dec 2015 Porto (Portugal)
Developing new feeding prediction models for aquaculture fish.

Recent Posts

Projects

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Recent Publications

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(2026). A digital twin for real-time biodiversity forecasting with citizen science data. Nature Ecology and Evolution.

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(2025). Long-term shifts in pikeperch, Sander lucioperca, diet composition in a changing reservoir. Journal of Fish Biology.

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(2025). Distinct Intra-Cohort Resource Utilization in Young-of-the-Year Pikeperch (Sander lucioperca): Evidence From Diet and Isotopic Analysis. Ecology and Evolution.

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(2025). Fragmented Networks: Challenges in communication and cohesion of European Biodiversity Research Infrastructures. Biodiversity Data Journal.

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(2025). Sustainability of large language models—user perspective. Frontiers in Ecology and the Environment.

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(2025). Mobilizing legacy data to eLTER: Mapping data resources and identifying community needs and preferences. ARPHA Conference Abstracts.

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(2025). Interacting with environmental data through web applications: case studies from the Biodiversity Digital Twin. ARPHA Conference Abstracts.

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(2025). Welcome to the first eLTER Science Conference. ARPHA Conference Abstracts.

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(2025). Simplifying cost calculations for eLTER sites and platforms: A flexible web application for site managers. EGU General Assembly 2025.

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(2025). Time-series (1909-2024) of forestry measurements and management practices in Hyytiälä Forest Station, Finland. Zenodo.

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Accomplish­ments

Helsinki University Open Science Award
The Helsinki University Open Science Award has been presented to the working group for data openness active at Hyytiälä Forest Station. The group includes Postdoctoral Researcher Allan Souza, Research Technician Silja Vuorenmaa, Research Coordinator Pekka Kaitaniemi and Project Planning Officer Tanja Lindholm. The award was granted for efforts to enable the reuse of research data produced at Hyytiälä Forest Station. Over the past century the station has hosted research and accumulated data, some of which have now been made available. The time-series (1909–2024) of forestry measurements and management practices in Hyytiälä Forest Station, Finland is available at Zenodo. The University of Helsinki’s Open Science Award is presented yearly in recognition of significant work to promote open science. This year the aim was to highlight the reuse of previously accumulated data in research. The jury stated that the data now published are valuable as such for further use. In addition, the jury wanted to emphasise that students and researchers have contributed to the accumulation of the research data over the years, and the award is also an acknowledgment of this collaborative effort. The award-winning endeavour also reflects the diverse, time-consuming, demanding and multiprofessional skills and input needed when data are made openly available retroactively. The Open Science Award jury also noted that the proposed recipients were of typically high quality. The proposals diversely highlighted perspectives related to this year’s theme, including different use of data previously compiled for another purpose, the increasingly effective use of data with the help of new innovations and the aggregation of data from various sources into datasets, databases or maps.

👨‍🔬 Top collaborators 👩‍🔬

🐚 Martina Ilarri 🇧🇷

CIIMAR 🇵🇹 - Twitter - ResearchGate - Website

🐚 Ronaldo Sousa 🇵🇹

University of Minho 🇵🇹 - ResearchGate - Website

🦀 Irene Martins 🇵🇹

CIIMAR 🇵🇹 - Twitter - ResearchGate

🦀 Joana Campos 🇵🇹

CIIMAR 🇵🇹 - ResearchGate

🐟 Marek Šmejkal 🇨🇿

Institute of Hydrobiology, Biology Centre CAS 🇨🇿 - ResearchGate

🐟 Jan Kubečka 🇨🇿

Institute of Hydrobiology, Biology Centre CAS 🇨🇿 - ResearchGate

🐟 Ivan Jarić 🇷🇸

University of Paris-Saclay 🇫🇷 - Twitter - ResearchGate - Website

Contact

  • allan.souza@helsinki.fi
  • +358 504327207
  • Latokartanonkaari 7, P.O. Box 27, University of Helsinki, Helsinki, 00014
  • Every weekday from 09:00 to 17:00
  • Send me a message